Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Gm13385-201ENSMUST00000121089 220 ntBASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Mir6956-201ENSMUST00000183598 62 ntBASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trub1Q8C0D0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Gm4875-201ENSMUST00000118257 786 ntBASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Gm44719-201ENSMUST00000206404 149 ntBASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trub1Q8C0D0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trub1Q8C0D0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trub1Q8C0D0 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trub1Q8C0D0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.27□□□□□ -0.12
Trub1Q8C0D0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trub1Q8C0D0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trub1Q8C0D0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trub1Q8C0D0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trub1Q8C0D0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trub1Q8C0D0 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Gm27306-201ENSMUST00000183970 107 ntBASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms