Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Mir692-1-201ENSMUST00000102263 109 ntBASIC19.45■□□□□ 0.7
Usp47Q8BY87 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Gm7287-201ENSMUST00000205267 602 ntBASIC19.45■□□□□ 0.7
Usp47Q8BY87 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Gm8598-201ENSMUST00000221184 836 ntBASIC19.45■□□□□ 0.7
Usp47Q8BY87 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Gm38058-201ENSMUST00000194323 4368 ntBASIC19.45■□□□□ 0.7
Usp47Q8BY87 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp47Q8BY87 Mir1894-201ENSMUST00000122802 81 ntBASIC19.44■□□□□ 0.7
Usp47Q8BY87 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp47Q8BY87 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Gm15371-201ENSMUST00000117057 784 ntBASIC19.44■□□□□ 0.7
Usp47Q8BY87 Gm5303-201ENSMUST00000117943 1252 ntBASIC19.44■□□□□ 0.7
Usp47Q8BY87 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC19.44■□□□□ 0.7
Usp47Q8BY87 Gm27892-201ENSMUST00000185017 106 ntBASIC19.44■□□□□ 0.7
Usp47Q8BY87 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp47Q8BY87 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp47Q8BY87 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC19.43■□□□□ 0.7
Usp47Q8BY87 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp47Q8BY87 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp47Q8BY87 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Usp47Q8BY87 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.42■□□□□ 0.7
Usp47Q8BY87 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC19.42■□□□□ 0.7
Usp47Q8BY87 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp47Q8BY87 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp47Q8BY87 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp47Q8BY87 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp47Q8BY87 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp47Q8BY87 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp47Q8BY87 AC139350.1-201ENSMUST00000227064 1594 ntBASIC19.42■□□□□ 0.7
Usp47Q8BY87 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC19.42■□□□□ 0.7
Usp47Q8BY87 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp47Q8BY87 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp47Q8BY87 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Usp47Q8BY87 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp47Q8BY87 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp47Q8BY87 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp47Q8BY87 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Usp47Q8BY87 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Usp47Q8BY87 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Usp47Q8BY87 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp47Q8BY87 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp47Q8BY87 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp47Q8BY87 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC19.41■□□□□ 0.7
Usp47Q8BY87 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms