Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.03□□□□□ -0.16
Usp43Q8BUM9 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp43Q8BUM9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp43Q8BUM9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.02□□□□□ -0.16
Usp43Q8BUM9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp43Q8BUM9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp43Q8BUM9 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp43Q8BUM9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.02□□□□□ -0.16
Usp43Q8BUM9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp43Q8BUM9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp43Q8BUM9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp43Q8BUM9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp43Q8BUM9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Usp43Q8BUM9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp43Q8BUM9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp43Q8BUM9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.02□□□□□ -0.16
Usp43Q8BUM9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Usp43Q8BUM9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp43Q8BUM9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp43Q8BUM9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp43Q8BUM9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp43Q8BUM9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Usp43Q8BUM9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp43Q8BUM9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Usp43Q8BUM9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp43Q8BUM9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp43Q8BUM9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Usp43Q8BUM9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 418.6 ms