Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Gm27847-201ENSMUST00000183711 107 ntBASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Gm27375-201ENSMUST00000183799 107 ntBASIC14.67□□□□□ -0.06
Rd3Q8BRE0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.67□□□□□ -0.06
Rd3Q8BRE0 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.66□□□□□ -0.06
Rd3Q8BRE0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Gm38671-201ENSMUST00000200573 130 ntBASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.66□□□□□ -0.06
Rd3Q8BRE0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Gm11814-201ENSMUST00000119515 929 ntBASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Mir6420-201ENSMUST00000185032 102 ntBASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Gm29741-201ENSMUST00000192667 421 ntBASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Gm6091-201ENSMUST00000098307 165 ntBASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rd3Q8BRE0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms