Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Gm45612-201ENSMUST00000211320 160 ntBASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Chmp2bQ8BJF9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp2bQ8BJF9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp2bQ8BJF9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp2bQ8BJF9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp2bQ8BJF9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Gm14494-201ENSMUST00000118786 435 ntBASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Gm44608-201ENSMUST00000206827 855 ntBASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Gm10175-201ENSMUST00000086013 645 ntBASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.2□□□□□ -0.14
Chmp2bQ8BJF9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Gm11779-201ENSMUST00000118541 368 ntBASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Gm38225-201ENSMUST00000194001 393 ntBASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2bQ8BJF9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Gm13823-201ENSMUST00000119930 345 ntBASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Gm6222-201ENSMUST00000120787 396 ntBASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Gm2445-201ENSMUST00000182798 989 ntBASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms