Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Rnf38Q8BI21 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rnf38Q8BI21 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Gm13823-201ENSMUST00000119930 345 ntBASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Gm14822-201ENSMUST00000122247 291 ntBASIC13.39□□□□□ -0.27
Rnf38Q8BI21 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Gm44608-201ENSMUST00000206827 855 ntBASIC13.39□□□□□ -0.27
Rnf38Q8BI21 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.39□□□□□ -0.27
Rnf38Q8BI21 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.39□□□□□ -0.27
Rnf38Q8BI21 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf38Q8BI21 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Gm38225-201ENSMUST00000194001 393 ntBASIC13.38□□□□□ -0.27
Rnf38Q8BI21 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.38□□□□□ -0.27
Rnf38Q8BI21 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf38Q8BI21 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms