Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nod1Q8BHB0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nod1Q8BHB0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nod1Q8BHB0 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.55□□□□□ -0.08
Nod1Q8BHB0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nod1Q8BHB0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Gm17420-201ENSMUST00000164753 153 ntBASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Gm29741-201ENSMUST00000192667 421 ntBASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.54□□□□□ -0.08
Nod1Q8BHB0 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nod1Q8BHB0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Snora78-201ENSMUST00000158630 128 ntBASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Gm38223-201ENSMUST00000194484 695 ntBASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nod1Q8BHB0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Nod1Q8BHB0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nod1Q8BHB0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Nod1Q8BHB0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nod1Q8BHB0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.52□□□□□ -0.08
Nod1Q8BHB0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nod1Q8BHB0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nod1Q8BHB0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nod1Q8BHB0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Nod1Q8BHB0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nod1Q8BHB0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Nod1Q8BHB0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nod1Q8BHB0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nod1Q8BHB0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nod1Q8BHB0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Nod1Q8BHB0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Nod1Q8BHB0 Gm14660-201ENSMUST00000119809 575 ntBASIC14.52□□□□□ -0.09
Nod1Q8BHB0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nod1Q8BHB0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nod1Q8BHB0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.52□□□□□ -0.09
Nod1Q8BHB0 Gm44397-201ENSMUST00000195950 113 ntBASIC14.52□□□□□ -0.09
Nod1Q8BHB0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nod1Q8BHB0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nod1Q8BHB0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nod1Q8BHB0 Gm10478-201ENSMUST00000084451 396 ntBASIC14.52□□□□□ -0.09
Nod1Q8BHB0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nod1Q8BHB0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nod1Q8BHB0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Nod1Q8BHB0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Nod1Q8BHB0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.52□□□□□ -0.09
Nod1Q8BHB0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nod1Q8BHB0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nod1Q8BHB0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.52□□□□□ -0.09
Nod1Q8BHB0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms