Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Gm44608-201ENSMUST00000206827 855 ntBASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Depdc1bQ8BH88 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Depdc1bQ8BH88 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Depdc1bQ8BH88 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Depdc1bQ8BH88 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Depdc1bQ8BH88 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.08■□□□□ 0
Depdc1bQ8BH88 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.08■□□□□ 0
Depdc1bQ8BH88 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Gm45453-201ENSMUST00000211758 853 ntBASIC15.08■□□□□ 0
Depdc1bQ8BH88 Gm7775-201ENSMUST00000218871 853 ntBASIC15.08■□□□□ 0
Depdc1bQ8BH88 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Depdc1bQ8BH88 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 BC001981-202ENSMUST00000191393 1545 ntBASIC15.07■□□□□ 0
Depdc1bQ8BH88 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.07■□□□□ 0
Depdc1bQ8BH88 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Depdc1bQ8BH88 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Gm27631-201ENSMUST00000184163 466 ntBASIC15.07■□□□□ 0
Depdc1bQ8BH88 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Depdc1bQ8BH88 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Depdc1bQ8BH88 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Depdc1bQ8BH88 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Depdc1bQ8BH88 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.06■□□□□ 0
Depdc1bQ8BH88 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Depdc1bQ8BH88 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Depdc1bQ8BH88 Acot6-202ENSMUST00000222921 3622 ntBASIC15.06■□□□□ 0
Depdc1bQ8BH88 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Depdc1bQ8BH88 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.06■□□□□ 0
Depdc1bQ8BH88 Gm14719-201ENSMUST00000121891 340 ntBASIC15.06■□□□□ 0
Depdc1bQ8BH88 Gm27838-201ENSMUST00000184829 128 ntBASIC15.06■□□□□ 0
Depdc1bQ8BH88 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.06■□□□□ 0
Depdc1bQ8BH88 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.06■□□□□ 0
Depdc1bQ8BH88 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms