Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zc3hc1Q80YV2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Zc3hc1Q80YV2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Zc3hc1Q80YV2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zc3hc1Q80YV2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Zc3hc1Q80YV2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zc3hc1Q80YV2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zc3hc1Q80YV2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zc3hc1Q80YV2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Zc3hc1Q80YV2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zc3hc1Q80YV2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zc3hc1Q80YV2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Zc3hc1Q80YV2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zc3hc1Q80YV2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Zc3hc1Q80YV2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zc3hc1Q80YV2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zc3hc1Q80YV2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zc3hc1Q80YV2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Zc3hc1Q80YV2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Gm2651-201ENSMUST00000203560 838 ntBASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zc3hc1Q80YV2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3hc1Q80YV2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3hc1Q80YV2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Zc3hc1Q80YV2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.66□□□□□ -0.38
Zc3hc1Q80YV2 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Zc3hc1Q80YV2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3hc1Q80YV2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3hc1Q80YV2 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.66□□□□□ -0.38
Zc3hc1Q80YV2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zc3hc1Q80YV2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms