Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.26■□□□□ 0.03
Usp6nlQ80XC3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Usp6nlQ80XC3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Usp6nlQ80XC3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp6nlQ80XC3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp6nlQ80XC3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp6nlQ80XC3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp6nlQ80XC3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp6nlQ80XC3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Usp6nlQ80XC3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Usp6nlQ80XC3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Usp6nlQ80XC3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.26■□□□□ 0.03
Usp6nlQ80XC3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp6nlQ80XC3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp6nlQ80XC3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp6nlQ80XC3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp6nlQ80XC3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Gm8810-201ENSMUST00000172895 754 ntBASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp6nlQ80XC3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Gm10156-201ENSMUST00000122364 462 ntBASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Gm6152-201ENSMUST00000151704 340 ntBASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Usp6nlQ80XC3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Gm5687-201ENSMUST00000118252 640 ntBASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Gm27572-201ENSMUST00000183702 255 ntBASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Gm5370-201ENSMUST00000187187 574 ntBASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Gm18054-201ENSMUST00000207539 555 ntBASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.23■□□□□ 0.03
Usp6nlQ80XC3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms