Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3tc2Q80VA5 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3tc2Q80VA5 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.08■□□□□ 0.01
Sh3tc2Q80VA5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3tc2Q80VA5 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3tc2Q80VA5 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.08■□□□□ 0.01
Sh3tc2Q80VA5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3tc2Q80VA5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3tc2Q80VA5 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Snora78-201ENSMUST00000158630 128 ntBASIC15.08■□□□□ 0
Sh3tc2Q80VA5 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.08■□□□□ 0
Sh3tc2Q80VA5 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Gm8652-201ENSMUST00000181363 964 ntBASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Gm27731-201ENSMUST00000185192 107 ntBASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.07■□□□□ 0
Sh3tc2Q80VA5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Gm15198-201ENSMUST00000117283 177 ntBASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Gm8463-201ENSMUST00000208573 613 ntBASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms