Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpp38Q80UU2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Rpp38Q80UU2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpp38Q80UU2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpp38Q80UU2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpp38Q80UU2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.83□□□□□ -0.2
Rpp38Q80UU2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpp38Q80UU2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpp38Q80UU2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpp38Q80UU2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpp38Q80UU2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpp38Q80UU2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpp38Q80UU2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpp38Q80UU2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpp38Q80UU2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpp38Q80UU2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rpp38Q80UU2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Gm27772-201ENSMUST00000184900 187 ntBASIC13.82□□□□□ -0.2
Rpp38Q80UU2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpp38Q80UU2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Syt7-204ENSMUST00000223586 1344 ntBASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.81□□□□□ -0.2
Rpp38Q80UU2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpp38Q80UU2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpp38Q80UU2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rpp38Q80UU2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpp38Q80UU2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.8□□□□□ -0.2
Rpp38Q80UU2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.8□□□□□ -0.2
Rpp38Q80UU2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rpp38Q80UU2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpp38Q80UU2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms