Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.14■□□□□ 0.01
Ush1gQ80T11 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1gQ80T11 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.13■□□□□ 0.01
Ush1gQ80T11 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.13■□□□□ 0.01
Ush1gQ80T11 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.13■□□□□ 0.01
Ush1gQ80T11 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1gQ80T11 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1gQ80T11 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Gm18905-201ENSMUST00000205454 928 ntBASIC15.12■□□□□ 0.01
Ush1gQ80T11 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.12■□□□□ 0.01
Ush1gQ80T11 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.12■□□□□ 0.01
Ush1gQ80T11 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1gQ80T11 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms