Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 AC155298.2-201ENSMUST00000225485 6226 ntBASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Gm44872-201ENSMUST00000207864 420 ntBASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3d21Q7TSG5 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Gm27680-201ENSMUST00000184192 160 ntBASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3d21Q7TSG5 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Gm15393-201ENSMUST00000120499 219 ntBASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Gm3436-201ENSMUST00000179930 840 ntBASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Gm29741-201ENSMUST00000192667 421 ntBASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Sh3d21Q7TSG5 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d21Q7TSG5 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d21Q7TSG5 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d21Q7TSG5 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Sh3d21Q7TSG5 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d21Q7TSG5 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms