Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cspg5Q71M36 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cspg5Q71M36 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cspg5Q71M36 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.39□□□□□ -0.11
Cspg5Q71M36 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.39□□□□□ -0.11
Cspg5Q71M36 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.39□□□□□ -0.11
Cspg5Q71M36 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.39□□□□□ -0.11
Cspg5Q71M36 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.39□□□□□ -0.11
Cspg5Q71M36 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.39□□□□□ -0.11
Cspg5Q71M36 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.39□□□□□ -0.11
Cspg5Q71M36 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg5Q71M36 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.39□□□□□ -0.11
Cspg5Q71M36 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Gm15678-201ENSMUST00000117573 960 ntBASIC14.38□□□□□ -0.11
Cspg5Q71M36 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.38□□□□□ -0.11
Cspg5Q71M36 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.38□□□□□ -0.11
Cspg5Q71M36 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.38□□□□□ -0.11
Cspg5Q71M36 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cspg5Q71M36 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg5Q71M36 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Gm15460-201ENSMUST00000118147 391 ntBASIC14.37□□□□□ -0.11
Cspg5Q71M36 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Gm5356-201ENSMUST00000093326 615 ntBASIC14.37□□□□□ -0.11
Cspg5Q71M36 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms