Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.05■□□□□ 0.16
Nup98Q6PFD9 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.05■□□□□ 0.16
Nup98Q6PFD9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.05■□□□□ 0.16
Nup98Q6PFD9 n-R5s195-201ENSMUST00000082891 119 ntBASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Gm43758-201ENSMUST00000199500 367 ntBASIC16.04■□□□□ 0.16
Nup98Q6PFD9 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Gm12846-201ENSMUST00000120431 1373 ntBASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Nup98Q6PFD9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Gm25927-201ENSMUST00000175058 117 ntBASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Gm6222-202ENSMUST00000182143 629 ntBASIC16.03■□□□□ 0.16
Nup98Q6PFD9 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Gm44069-201ENSMUST00000204898 506 ntBASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nup98Q6PFD9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms