Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Gm42670-201ENSMUST00000201816 1292 ntBASIC10.04□□□□□ -0.8
Ndufa4Q62425 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Gm44608-201ENSMUST00000206827 855 ntBASIC10.04□□□□□ -0.8
Ndufa4Q62425 Gm6376-201ENSMUST00000209407 580 ntBASIC10.04□□□□□ -0.8
Ndufa4Q62425 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Gm18669-201ENSMUST00000216049 778 ntBASIC10.04□□□□□ -0.8
Ndufa4Q62425 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ndufa4Q62425 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.03□□□□□ -0.8
Ndufa4Q62425 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Gm16198-201ENSMUST00000118766 670 ntBASIC10.03□□□□□ -0.8
Ndufa4Q62425 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.03□□□□□ -0.8
Ndufa4Q62425 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.03□□□□□ -0.8
Ndufa4Q62425 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC10.03□□□□□ -0.8
Ndufa4Q62425 AC131709.1-201ENSMUST00000224731 1180 ntBASIC10.03□□□□□ -0.8
Ndufa4Q62425 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ndufa4Q62425 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC10.02□□□□□ -0.8
Ndufa4Q62425 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ndufa4Q62425 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Ndufa4Q62425 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Ndufa4Q62425 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Ndufa4Q62425 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Ndufa4Q62425 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Ndufa4Q62425 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Ndufa4Q62425 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ndufa4Q62425 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ndufa4Q62425 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ndufa4Q62425 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ndufa4Q62425 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms