Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
AtmQ62388 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.84□□□□□ -0.35
AtmQ62388 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.84□□□□□ -0.35
AtmQ62388 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AtmQ62388 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AtmQ62388 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
AtmQ62388 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AtmQ62388 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AtmQ62388 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
AtmQ62388 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.84□□□□□ -0.35
AtmQ62388 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
AtmQ62388 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
AtmQ62388 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
AtmQ62388 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
AtmQ62388 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
AtmQ62388 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AtmQ62388 Gm11331-201ENSMUST00000119764 288 ntBASIC12.83□□□□□ -0.36
AtmQ62388 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AtmQ62388 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.83□□□□□ -0.36
AtmQ62388 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AtmQ62388 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AtmQ62388 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AtmQ62388 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
AtmQ62388 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AtmQ62388 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AtmQ62388 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AtmQ62388 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AtmQ62388 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.83□□□□□ -0.36
AtmQ62388 Gm13047-201ENSMUST00000117116 815 ntBASIC12.83□□□□□ -0.36
AtmQ62388 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AtmQ62388 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.83□□□□□ -0.36
AtmQ62388 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.83□□□□□ -0.36
AtmQ62388 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.83□□□□□ -0.36
AtmQ62388 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AtmQ62388 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.83□□□□□ -0.36
AtmQ62388 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AtmQ62388 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.83□□□□□ -0.36
AtmQ62388 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
AtmQ62388 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AtmQ62388 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
AtmQ62388 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AtmQ62388 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
AtmQ62388 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AtmQ62388 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AtmQ62388 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.83□□□□□ -0.36
AtmQ62388 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
AtmQ62388 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
AtmQ62388 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Gm7809-201ENSMUST00000153199 742 ntBASIC12.82□□□□□ -0.36
AtmQ62388 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.82□□□□□ -0.36
AtmQ62388 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.82□□□□□ -0.36
AtmQ62388 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.82□□□□□ -0.36
AtmQ62388 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.82□□□□□ -0.36
AtmQ62388 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.82□□□□□ -0.36
AtmQ62388 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.82□□□□□ -0.36
AtmQ62388 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.82□□□□□ -0.36
AtmQ62388 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.82□□□□□ -0.36
AtmQ62388 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.82□□□□□ -0.36
AtmQ62388 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
AtmQ62388 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
AtmQ62388 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
AtmQ62388 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
AtmQ62388 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.82□□□□□ -0.36
AtmQ62388 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.82□□□□□ -0.36
AtmQ62388 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.82□□□□□ -0.36
AtmQ62388 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
AtmQ62388 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms