Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SspnQ62147 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.62□□□□□ -0.55
SspnQ62147 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
SspnQ62147 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
SspnQ62147 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 Gm4995-201ENSMUST00000117247 432 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.62□□□□□ -0.55
SspnQ62147 Gm6222-201ENSMUST00000120787 396 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm13365-201ENSMUST00000121188 973 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.62□□□□□ -0.55
SspnQ62147 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.62□□□□□ -0.55
SspnQ62147 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
SspnQ62147 Gm29310-201ENSMUST00000185468 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm21825-201ENSMUST00000185728 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm29109-201ENSMUST00000185895 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm21896-201ENSMUST00000186520 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm21873-201ENSMUST00000186728 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm21794-201ENSMUST00000187056 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm21880-201ENSMUST00000187275 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm21826-201ENSMUST00000187451 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm21198-201ENSMUST00000188393 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm21749-201ENSMUST00000189343 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm21901-201ENSMUST00000189568 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm29424-201ENSMUST00000189716 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm28599-201ENSMUST00000189838 694 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm21867-201ENSMUST00000189917 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm29269-201ENSMUST00000190087 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm21722-201ENSMUST00000190153 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm28423-201ENSMUST00000190701 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm21899-201ENSMUST00000190745 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm21910-201ENSMUST00000191163 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm21849-201ENSMUST00000191571 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm28678-201ENSMUST00000191593 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm20910-201ENSMUST00000193268 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Gm21871-201ENSMUST00000194621 696 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.62□□□□□ -0.55
SspnQ62147 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.62□□□□□ -0.55
SspnQ62147 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
SspnQ62147 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SspnQ62147 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.62□□□□□ -0.55
SspnQ62147 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SspnQ62147 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
SspnQ62147 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
SspnQ62147 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SspnQ62147 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.62□□□□□ -0.55
SspnQ62147 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SspnQ62147 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
SspnQ62147 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
SspnQ62147 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SspnQ62147 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.61□□□□□ -0.55
SspnQ62147 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SspnQ62147 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.61□□□□□ -0.55
SspnQ62147 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
SspnQ62147 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.61□□□□□ -0.55
SspnQ62147 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.61□□□□□ -0.55
SspnQ62147 Gm2213-201ENSMUST00000197485 688 ntBASIC11.61□□□□□ -0.55
SspnQ62147 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
SspnQ62147 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
SspnQ62147 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.61□□□□□ -0.55
SspnQ62147 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SspnQ62147 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SspnQ62147 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SspnQ62147 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms