Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.71□□□□□ -0.37
VcanQ62059 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VcanQ62059 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VcanQ62059 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
VcanQ62059 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.71□□□□□ -0.38
VcanQ62059 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VcanQ62059 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VcanQ62059 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VcanQ62059 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VcanQ62059 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.71□□□□□ -0.38
VcanQ62059 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VcanQ62059 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
VcanQ62059 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VcanQ62059 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VcanQ62059 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VcanQ62059 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
VcanQ62059 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VcanQ62059 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VcanQ62059 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VcanQ62059 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
VcanQ62059 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.7□□□□□ -0.38
VcanQ62059 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.7□□□□□ -0.38
VcanQ62059 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Gm29608-201ENSMUST00000190444 463 ntBASIC12.7□□□□□ -0.38
VcanQ62059 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.7□□□□□ -0.38
VcanQ62059 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
VcanQ62059 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.7□□□□□ -0.38
VcanQ62059 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.7□□□□□ -0.38
VcanQ62059 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.7□□□□□ -0.38
VcanQ62059 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
VcanQ62059 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.7□□□□□ -0.38
VcanQ62059 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
VcanQ62059 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
VcanQ62059 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
VcanQ62059 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VcanQ62059 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
VcanQ62059 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.69□□□□□ -0.38
VcanQ62059 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Gm10434-201ENSMUST00000101158 471 ntBASIC12.69□□□□□ -0.38
VcanQ62059 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Rmrp-201ENSMUST00000157463 271 ntBASIC12.69□□□□□ -0.38
VcanQ62059 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.69□□□□□ -0.38
VcanQ62059 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.69□□□□□ -0.38
VcanQ62059 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
VcanQ62059 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
VcanQ62059 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
VcanQ62059 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Gm11340-201ENSMUST00000119226 412 ntBASIC12.69□□□□□ -0.38
VcanQ62059 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
VcanQ62059 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
VcanQ62059 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.69□□□□□ -0.38
VcanQ62059 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.69□□□□□ -0.38
VcanQ62059 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.69□□□□□ -0.38
VcanQ62059 Spcs1-203ENSMUST00000226374 592 ntBASIC12.69□□□□□ -0.38
VcanQ62059 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.69□□□□□ -0.38
VcanQ62059 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.69□□□□□ -0.38
VcanQ62059 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VcanQ62059 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
VcanQ62059 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
VcanQ62059 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.68□□□□□ -0.38
VcanQ62059 Gm38210-201ENSMUST00000191944 809 ntBASIC12.68□□□□□ -0.38
VcanQ62059 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms