Protein–RNA interactions for Protein: Q61660

Foxj1, Forkhead box protein J1, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxj1Q61660 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.09□□□□□ -0.15
Foxj1Q61660 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Gm8062-201ENSMUST00000139696 444 ntBASIC14.09□□□□□ -0.15
Foxj1Q61660 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.09□□□□□ -0.15
Foxj1Q61660 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Foxj1Q61660 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Foxj1Q61660 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.09□□□□□ -0.15
Foxj1Q61660 Gm27486-201ENSMUST00000184923 80 ntBASIC14.09□□□□□ -0.15
Foxj1Q61660 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.09□□□□□ -0.15
Foxj1Q61660 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.09□□□□□ -0.15
Foxj1Q61660 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Foxj1Q61660 Gm10478-201ENSMUST00000084451 396 ntBASIC14.09□□□□□ -0.15
Foxj1Q61660 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Mir497b-201ENSMUST00000093601 125 ntBASIC14.09□□□□□ -0.15
Foxj1Q61660 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.09□□□□□ -0.15
Foxj1Q61660 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.09□□□□□ -0.15
Foxj1Q61660 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Foxj1Q61660 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.09□□□□□ -0.15
Foxj1Q61660 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.09□□□□□ -0.15
Foxj1Q61660 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.09□□□□□ -0.15
Foxj1Q61660 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Foxj1Q61660 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Foxj1Q61660 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxj1Q61660 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Foxj1Q61660 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Foxj1Q61660 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Foxj1Q61660 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Foxj1Q61660 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Foxj1Q61660 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.08□□□□□ -0.15
Foxj1Q61660 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Foxj1Q61660 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Foxj1Q61660 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Foxj1Q61660 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Foxj1Q61660 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Snora78-201ENSMUST00000158630 128 ntBASIC14.08□□□□□ -0.16
Foxj1Q61660 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Gm17420-201ENSMUST00000164753 153 ntBASIC14.08□□□□□ -0.16
Foxj1Q61660 Gm45784-201ENSMUST00000188360 142 ntBASIC14.08□□□□□ -0.16
Foxj1Q61660 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Gm42693-201ENSMUST00000196779 631 ntBASIC14.08□□□□□ -0.16
Foxj1Q61660 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.08□□□□□ -0.16
Foxj1Q61660 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC14.08□□□□□ -0.16
Foxj1Q61660 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Foxj1Q61660 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.08□□□□□ -0.16
Foxj1Q61660 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.08□□□□□ -0.16
Foxj1Q61660 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.08□□□□□ -0.16
Foxj1Q61660 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Gm14667-201ENSMUST00000119448 1350 ntBASIC14.08□□□□□ -0.16
Foxj1Q61660 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxj1Q61660 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Foxj1Q61660 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Foxj1Q61660 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Foxj1Q61660 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Foxj1Q61660 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxj1Q61660 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxj1Q61660 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Foxj1Q61660 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Foxj1Q61660 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxj1Q61660 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.07□□□□□ -0.16
Foxj1Q61660 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Foxj1Q61660 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Foxj1Q61660 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms