Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trim38Q5SZ99 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Gm22175-201ENSMUST00000175007 78 ntBASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.39□□□□□ -0.11
Trim38Q5SZ99 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trim38Q5SZ99 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Gm21470-201ENSMUST00000187680 696 ntBASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim38Q5SZ99 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Gm14767-201ENSMUST00000121559 586 ntBASIC14.37□□□□□ -0.11
Trim38Q5SZ99 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms