Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Shank3Q4ACU6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shank3Q4ACU6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Shank3Q4ACU6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Gm8738-201ENSMUST00000172606 329 ntBASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Mir6927-201ENSMUST00000184494 71 ntBASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Mir5120-201ENSMUST00000175020 78 ntBASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 AC123857.2-201ENSMUST00000225756 1582 ntBASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank3Q4ACU6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shank3Q4ACU6 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shank3Q4ACU6 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Shank3Q4ACU6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.83■□□□□ 0.29
Shank3Q4ACU6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.83■□□□□ 0.29
Shank3Q4ACU6 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shank3Q4ACU6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shank3Q4ACU6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shank3Q4ACU6 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Gm13665-201ENSMUST00000120830 528 ntBASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Gm8099-201ENSMUST00000200510 742 ntBASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shank3Q4ACU6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Gm13570-201ENSMUST00000140763 309 ntBASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Gm19221-201ENSMUST00000221827 1477 ntBASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 AC167669.2-201ENSMUST00000224417 1620 ntBASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Gm23200-201ENSMUST00000104379 132 ntBASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Gm9004-201ENSMUST00000218739 1222 ntBASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shank3Q4ACU6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shank3Q4ACU6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shank3Q4ACU6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shank3Q4ACU6 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shank3Q4ACU6 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shank3Q4ACU6 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Shank3Q4ACU6 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Shank3Q4ACU6 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shank3Q4ACU6 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC16.81■□□□□ 0.28
Shank3Q4ACU6 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shank3Q4ACU6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shank3Q4ACU6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shank3Q4ACU6 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shank3Q4ACU6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms