Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Bbof1Q3V079 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.25■□□□□ 0.03
Bbof1Q3V079 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Bbof1Q3V079 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Bbof1Q3V079 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Bbof1Q3V079 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Bbof1Q3V079 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.24■□□□□ 0.03
Bbof1Q3V079 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.24■□□□□ 0.03
Bbof1Q3V079 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Gm10576-201ENSMUST00000191927 825 ntBASIC15.24■□□□□ 0.03
Bbof1Q3V079 AA619741-201ENSMUST00000195095 646 ntBASIC15.24■□□□□ 0.03
Bbof1Q3V079 Gm45453-201ENSMUST00000211758 853 ntBASIC15.24■□□□□ 0.03
Bbof1Q3V079 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Bbof1Q3V079 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Bbof1Q3V079 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Gm27618-201ENSMUST00000183671 60 ntBASIC15.23■□□□□ 0.03
Bbof1Q3V079 Gm27631-201ENSMUST00000184163 466 ntBASIC15.23■□□□□ 0.03
Bbof1Q3V079 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.23■□□□□ 0.03
Bbof1Q3V079 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.23■□□□□ 0.03
Bbof1Q3V079 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Bbof1Q3V079 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Bbof1Q3V079 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.22■□□□□ 0.03
Bbof1Q3V079 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Gm13453-201ENSMUST00000118708 357 ntBASIC15.22■□□□□ 0.03
Bbof1Q3V079 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Gm6888-201ENSMUST00000221983 706 ntBASIC15.22■□□□□ 0.03
Bbof1Q3V079 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Bbof1Q3V079 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Bbof1Q3V079 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Bbof1Q3V079 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Bbof1Q3V079 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Bbof1Q3V079 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Bbof1Q3V079 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms