Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.07■□□□□ 0.16
Cdkl5Q3UTQ8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Gm7775-201ENSMUST00000218871 853 ntBASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkl5Q3UTQ8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Gm44872-201ENSMUST00000207864 420 ntBASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkl5Q3UTQ8 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms