Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Upf3aQ3ULJ3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.52□□□□□ -0.08
Upf3aQ3ULJ3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upf3aQ3ULJ3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 Gm27331-201ENSMUST00000183705 60 ntBASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Upf3aQ3ULJ3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Gm27572-201ENSMUST00000183702 255 ntBASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.51□□□□□ -0.09
Upf3aQ3ULJ3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Gm29705-201ENSMUST00000212598 474 ntBASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upf3aQ3ULJ3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms