Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rapgef1Q3UHC1 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Gm5566-201ENSMUST00000116118 459 ntBASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rapgef1Q3UHC1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Gm9719-201ENSMUST00000162765 543 ntBASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Gm5866-201ENSMUST00000177881 973 ntBASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Rapgef1Q3UHC1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rapgef1Q3UHC1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rapgef1Q3UHC1 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.15■□□□□ 0.02
Rapgef1Q3UHC1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rapgef1Q3UHC1 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.15■□□□□ 0.02
Rapgef1Q3UHC1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rapgef1Q3UHC1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rapgef1Q3UHC1 Matn2-206ENSMUST00000228570 2798 ntBASIC15.15■□□□□ 0.02
Rapgef1Q3UHC1 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms