Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Gm12933-201ENSMUST00000120203 872 ntBASIC11.38□□□□□ -0.59
Trim63Q38HM4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.38□□□□□ -0.59
Trim63Q38HM4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.38□□□□□ -0.59
Trim63Q38HM4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC11.38□□□□□ -0.59
Trim63Q38HM4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.38□□□□□ -0.59
Trim63Q38HM4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.37□□□□□ -0.59
Trim63Q38HM4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.37□□□□□ -0.59
Trim63Q38HM4 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.37□□□□□ -0.59
Trim63Q38HM4 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim63Q38HM4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.36□□□□□ -0.59
Trim63Q38HM4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms