Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Gm26513-201ENSMUST00000181802 2489 ntBASIC19.28■□□□□ 0.68
Xrn1P97789 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrn1P97789 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrn1P97789 Gm11531-201ENSMUST00000117614 555 ntBASIC19.28■□□□□ 0.68
Xrn1P97789 Gm6161-201ENSMUST00000121942 1102 ntBASIC19.28■□□□□ 0.68
Xrn1P97789 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Xrn1P97789 Gm6254-201ENSMUST00000168178 1072 ntBASIC19.28■□□□□ 0.68
Xrn1P97789 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrn1P97789 Gm6153-201ENSMUST00000172004 1058 ntBASIC19.28■□□□□ 0.68
Xrn1P97789 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Xrn1P97789 Gm5641-202ENSMUST00000198699 1080 ntBASIC19.28■□□□□ 0.68
Xrn1P97789 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrn1P97789 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrn1P97789 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Xrn1P97789 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Xrn1P97789 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Xrn1P97789 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Xrn1P97789 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Xrn1P97789 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Xrn1P97789 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Xrn1P97789 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.27■□□□□ 0.68
Xrn1P97789 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Xrn1P97789 Gm13875-201ENSMUST00000120162 282 ntBASIC19.27■□□□□ 0.68
Xrn1P97789 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC19.27■□□□□ 0.68
Xrn1P97789 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Xrn1P97789 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Xrn1P97789 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC19.27■□□□□ 0.68
Xrn1P97789 Gm43138-201ENSMUST00000199123 708 ntBASIC19.27■□□□□ 0.68
Xrn1P97789 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC19.27■□□□□ 0.68
Xrn1P97789 Gm45504-201ENSMUST00000211407 2107 ntBASIC19.27■□□□□ 0.68
Xrn1P97789 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Xrn1P97789 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Xrn1P97789 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Xrn1P97789 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Xrn1P97789 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Xrn1P97789 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Xrn1P97789 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Xrn1P97789 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Xrn1P97789 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Xrn1P97789 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrn1P97789 Tmed9-203ENSMUST00000224741 1450 ntBASIC19.26■□□□□ 0.67
Xrn1P97789 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Xrn1P97789 Gm14130-201ENSMUST00000118417 987 ntBASIC19.26■□□□□ 0.67
Xrn1P97789 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Xrn1P97789 AC126253.1-202ENSMUST00000226732 835 ntBASIC19.26■□□□□ 0.67
Xrn1P97789 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrn1P97789 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrn1P97789 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrn1P97789 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC19.26■□□□□ 0.67
Xrn1P97789 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Xrn1P97789 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrn1P97789 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC19.26■□□□□ 0.67
Xrn1P97789 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrn1P97789 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.26■□□□□ 0.67
Xrn1P97789 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC19.26■□□□□ 0.67
Xrn1P97789 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrn1P97789 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrn1P97789 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrn1P97789 Gm12217-201ENSMUST00000118858 696 ntBASIC19.25■□□□□ 0.67
Xrn1P97789 Gm4760-201ENSMUST00000119663 1030 ntBASIC19.25■□□□□ 0.67
Xrn1P97789 Gm13570-201ENSMUST00000140763 309 ntBASIC19.25■□□□□ 0.67
Xrn1P97789 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrn1P97789 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Xrn1P97789 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC19.25■□□□□ 0.67
Xrn1P97789 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC19.25■□□□□ 0.67
Xrn1P97789 Gm10702-201ENSMUST00000098929 1268 ntBASIC19.25■□□□□ 0.67
Xrn1P97789 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC19.25■□□□□ 0.67
Xrn1P97789 Gm42872-201ENSMUST00000200026 1967 ntBASIC19.25■□□□□ 0.67
Xrn1P97789 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Xrn1P97789 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Xrn1P97789 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrn1P97789 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Xrn1P97789 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrn1P97789 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrn1P97789 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrn1P97789 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Xrn1P97789 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Xrn1P97789 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Xrn1P97789 Mir6979-201ENSMUST00000183927 56 ntBASIC19.25■□□□□ 0.67
Xrn1P97789 Mir6927-201ENSMUST00000184494 71 ntBASIC19.25■□□□□ 0.67
Xrn1P97789 Gm38297-201ENSMUST00000195122 1057 ntBASIC19.25■□□□□ 0.67
Xrn1P97789 Gm8228-201ENSMUST00000189949 2192 ntBASIC19.25■□□□□ 0.67
Xrn1P97789 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrn1P97789 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrn1P97789 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrn1P97789 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrn1P97789 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrn1P97789 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrn1P97789 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrn1P97789 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC19.24■□□□□ 0.67
Xrn1P97789 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Xrn1P97789 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Xrn1P97789 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC19.24■□□□□ 0.67
Xrn1P97789 B9d1os-201ENSMUST00000137010 674 ntBASIC19.24■□□□□ 0.67
Xrn1P97789 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC19.24■□□□□ 0.67
Xrn1P97789 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Xrn1P97789 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC19.24■□□□□ 0.67
Xrn1P97789 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrn1P97789 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrn1P97789 Gm4366-201ENSMUST00000201488 1342 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms