Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Gm13123-201ENSMUST00000122173 492 ntBASIC17.3■□□□□ 0.36
Nkx2-3P97334 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Gm27501-201ENSMUST00000183599 107 ntBASIC17.3■□□□□ 0.36
Nkx2-3P97334 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Gm9257-201ENSMUST00000221254 232 ntBASIC17.3■□□□□ 0.36
Nkx2-3P97334 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Gm24526-201ENSMUST00000082921 158 ntBASIC17.3■□□□□ 0.36
Nkx2-3P97334 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC17.3■□□□□ 0.36
Nkx2-3P97334 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Gm6222-202ENSMUST00000182143 629 ntBASIC17.29■□□□□ 0.36
Nkx2-3P97334 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.29■□□□□ 0.36
Nkx2-3P97334 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.29■□□□□ 0.36
Nkx2-3P97334 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.29■□□□□ 0.36
Nkx2-3P97334 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.29■□□□□ 0.36
Nkx2-3P97334 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-3P97334 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Gm18630-201ENSMUST00000222109 1397 ntBASIC17.28■□□□□ 0.36
Nkx2-3P97334 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Gm14723-201ENSMUST00000118686 215 ntBASIC17.28■□□□□ 0.36
Nkx2-3P97334 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.28■□□□□ 0.36
Nkx2-3P97334 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC17.28■□□□□ 0.36
Nkx2-3P97334 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Nkx2-3P97334 CT573086.1-201ENSMUST00000227202 1074 ntBASIC17.28■□□□□ 0.36
Nkx2-3P97334 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Gm10146-201ENSMUST00000072739 309 ntBASIC17.28■□□□□ 0.36
Nkx2-3P97334 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-3P97334 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-3P97334 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-3P97334 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-3P97334 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-3P97334 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-3P97334 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-3P97334 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
Nkx2-3P97334 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Nkx2-3P97334 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nkx2-3P97334 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-3P97334 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.27■□□□□ 0.36
Nkx2-3P97334 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC17.27■□□□□ 0.36
Nkx2-3P97334 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.27■□□□□ 0.36
Nkx2-3P97334 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-3P97334 Gm37008-201ENSMUST00000195712 319 ntBASIC17.27■□□□□ 0.36
Nkx2-3P97334 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-3P97334 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nkx2-3P97334 Abhd6-203ENSMUST00000225234 1958 ntBASIC17.27■□□□□ 0.36
Nkx2-3P97334 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-3P97334 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms