Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
H3f3aP84244 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
H3f3aP84244 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
H3f3aP84244 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
H3f3aP84244 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.34□□□□□ -0.43
H3f3aP84244 Mir698-201ENSMUST00000102164 109 ntBASIC12.34□□□□□ -0.43
H3f3aP84244 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Gm13385-201ENSMUST00000121089 220 ntBASIC12.34□□□□□ -0.43
H3f3aP84244 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.34□□□□□ -0.43
H3f3aP84244 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
H3f3aP84244 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Gm9522-201ENSMUST00000182394 926 ntBASIC12.34□□□□□ -0.43
H3f3aP84244 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.34□□□□□ -0.43
H3f3aP84244 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.34□□□□□ -0.43
H3f3aP84244 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.34□□□□□ -0.43
H3f3aP84244 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.34□□□□□ -0.43
H3f3aP84244 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
H3f3aP84244 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.34□□□□□ -0.43
H3f3aP84244 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
H3f3aP84244 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
H3f3aP84244 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H3f3aP84244 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.33□□□□□ -0.44
H3f3aP84244 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
H3f3aP84244 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.33□□□□□ -0.44
H3f3aP84244 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.33□□□□□ -0.44
H3f3aP84244 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
H3f3aP84244 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
H3f3aP84244 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.33□□□□□ -0.44
H3f3aP84244 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.33□□□□□ -0.44
H3f3aP84244 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.33□□□□□ -0.44
H3f3aP84244 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
H3f3aP84244 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Gm8927-201ENSMUST00000181978 981 ntBASIC12.33□□□□□ -0.44
H3f3aP84244 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
H3f3aP84244 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
H3f3aP84244 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.33□□□□□ -0.44
H3f3aP84244 Gm20445-201ENSMUST00000061905 565 ntBASIC12.33□□□□□ -0.44
H3f3aP84244 Gm3222-201ENSMUST00000071282 990 ntBASIC12.33□□□□□ -0.44
H3f3aP84244 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
H3f3aP84244 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
H3f3aP84244 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
H3f3aP84244 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.33□□□□□ -0.44
H3f3aP84244 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.33□□□□□ -0.44
H3f3aP84244 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
H3f3aP84244 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.33□□□□□ -0.44
H3f3aP84244 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H3f3aP84244 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.33□□□□□ -0.44
H3f3aP84244 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms