Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.26□□□□□ -0.13
Msx3P70354 Gm21470-201ENSMUST00000187680 696 ntBASIC14.26□□□□□ -0.13
Msx3P70354 Gm43575-201ENSMUST00000196420 516 ntBASIC14.26□□□□□ -0.13
Msx3P70354 Gm46209-201ENSMUST00000217912 553 ntBASIC14.26□□□□□ -0.13
Msx3P70354 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msx3P70354 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Msx3P70354 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msx3P70354 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msx3P70354 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msx3P70354 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msx3P70354 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msx3P70354 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msx3P70354 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msx3P70354 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.25□□□□□ -0.13
Msx3P70354 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Msx3P70354 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.25□□□□□ -0.13
Msx3P70354 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Msx3P70354 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.25□□□□□ -0.13
Msx3P70354 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.25□□□□□ -0.13
Msx3P70354 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.25□□□□□ -0.13
Msx3P70354 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Gm25948-201ENSMUST00000175334 112 ntBASIC14.25□□□□□ -0.13
Msx3P70354 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.25□□□□□ -0.13
Msx3P70354 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.25□□□□□ -0.13
Msx3P70354 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.25□□□□□ -0.13
Msx3P70354 Gm5425-201ENSMUST00000214125 459 ntBASIC14.25□□□□□ -0.13
Msx3P70354 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Mir497b-201ENSMUST00000093601 125 ntBASIC14.25□□□□□ -0.13
Msx3P70354 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Msx3P70354 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Msx3P70354 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.25□□□□□ -0.13
Msx3P70354 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msx3P70354 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Msx3P70354 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.24□□□□□ -0.13
Msx3P70354 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.24□□□□□ -0.13
Msx3P70354 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Gm14701-201ENSMUST00000117156 348 ntBASIC14.24□□□□□ -0.13
Msx3P70354 Gm15393-201ENSMUST00000120499 219 ntBASIC14.24□□□□□ -0.13
Msx3P70354 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Msx3P70354 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Msx3P70354 Gm4804-201ENSMUST00000182234 999 ntBASIC14.24□□□□□ -0.13
Msx3P70354 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.24□□□□□ -0.13
Msx3P70354 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.24□□□□□ -0.13
Msx3P70354 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.24□□□□□ -0.13
Msx3P70354 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.24□□□□□ -0.13
Msx3P70354 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Msx3P70354 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.24□□□□□ -0.13
Msx3P70354 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Msx3P70354 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Msx3P70354 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Msx3P70354 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Msx3P70354 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Msx3P70354 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms