Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm5620-201ENSMUST00000077991 1348 ntBASIC18.58■□□□□ 0.56
Nphp4P59240 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC18.58■□□□□ 0.56
Nphp4P59240 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nphp4P59240 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Nphp4P59240 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nphp4P59240 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Nphp4P59240 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nphp4P59240 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nphp4P59240 Gm13369-201ENSMUST00000119442 987 ntBASIC18.57■□□□□ 0.56
Nphp4P59240 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC18.57■□□□□ 0.56
Nphp4P59240 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
Nphp4P59240 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nphp4P59240 AC122305.4-201ENSMUST00000216159 1206 ntBASIC18.57■□□□□ 0.56
Nphp4P59240 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nphp4P59240 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nphp4P59240 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nphp4P59240 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nphp4P59240 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nphp4P59240 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nphp4P59240 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Nphp4P59240 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nphp4P59240 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nphp4P59240 Gm8706-201ENSMUST00000197372 1491 ntBASIC18.57■□□□□ 0.56
Nphp4P59240 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nphp4P59240 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nphp4P59240 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nphp4P59240 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Nphp4P59240 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nphp4P59240 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nphp4P59240 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nphp4P59240 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nphp4P59240 Gm43118-201ENSMUST00000199149 775 ntBASIC18.57■□□□□ 0.56
Nphp4P59240 Tyms-ps-201ENSMUST00000219550 915 ntBASIC18.57■□□□□ 0.56
Nphp4P59240 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Nphp4P59240 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nphp4P59240 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Nphp4P59240 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.56■□□□□ 0.56
Nphp4P59240 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nphp4P59240 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nphp4P59240 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nphp4P59240 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nphp4P59240 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nphp4P59240 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nphp4P59240 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nphp4P59240 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nphp4P59240 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nphp4P59240 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nphp4P59240 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nphp4P59240 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC18.56■□□□□ 0.56
Nphp4P59240 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nphp4P59240 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC18.56■□□□□ 0.56
Nphp4P59240 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
Nphp4P59240 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nphp4P59240 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC18.56■□□□□ 0.56
Nphp4P59240 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nphp4P59240 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nphp4P59240 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Nphp4P59240 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nphp4P59240 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nphp4P59240 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Nphp4P59240 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nphp4P59240 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nphp4P59240 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Nphp4P59240 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nphp4P59240 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nphp4P59240 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nphp4P59240 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Nphp4P59240 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nphp4P59240 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Nphp4P59240 AC173210.1-201ENSMUST00000222341 1131 ntBASIC18.55■□□□□ 0.56
Nphp4P59240 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nphp4P59240 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nphp4P59240 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nphp4P59240 Gm10146-201ENSMUST00000072739 309 ntBASIC18.55■□□□□ 0.56
Nphp4P59240 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nphp4P59240 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nphp4P59240 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nphp4P59240 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nphp4P59240 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nphp4P59240 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nphp4P59240 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC18.54■□□□□ 0.56
Nphp4P59240 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nphp4P59240 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC18.54■□□□□ 0.56
Nphp4P59240 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nphp4P59240 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nphp4P59240 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nphp4P59240 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nphp4P59240 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nphp4P59240 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nphp4P59240 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nphp4P59240 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nphp4P59240 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC18.54■□□□□ 0.56
Nphp4P59240 AC134335.2-201ENSMUST00000227660 440 ntBASIC18.54■□□□□ 0.56
Nphp4P59240 Gm16372-201ENSMUST00000073088 450 ntBASIC18.54■□□□□ 0.56
Nphp4P59240 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nphp4P59240 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nphp4P59240 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nphp4P59240 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nphp4P59240 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nphp4P59240 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms