Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ctdsp1P58466 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ctdsp1P58466 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ctdsp1P58466 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ctdsp1P58466 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ctdsp1P58466 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ctdsp1P58466 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ctdsp1P58466 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.78□□□□□ -0.68
Ctdsp1P58466 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Gm5837-201ENSMUST00000191844 1369 ntBASIC10.78□□□□□ -0.68
Ctdsp1P58466 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Rprl3-201ENSMUST00000157400 290 ntBASIC10.78□□□□□ -0.68
Ctdsp1P58466 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Gm44454-201ENSMUST00000198541 138 ntBASIC10.78□□□□□ -0.68
Ctdsp1P58466 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.78□□□□□ -0.68
Ctdsp1P58466 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC10.78□□□□□ -0.68
Ctdsp1P58466 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ctdsp1P58466 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ctdsp1P58466 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ctdsp1P58466 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Ctdsp1P58466 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ctdsp1P58466 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ctdsp1P58466 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ctdsp1P58466 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ctdsp1P58466 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.77□□□□□ -0.68
Ctdsp1P58466 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Ctdsp1P58466 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ctdsp1P58466 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ctdsp1P58466 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ctdsp1P58466 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ctdsp1P58466 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ctdsp1P58466 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ctdsp1P58466 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.77□□□□□ -0.69
Ctdsp1P58466 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ctdsp1P58466 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ctdsp1P58466 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.77□□□□□ -0.69
Ctdsp1P58466 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ctdsp1P58466 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Ctdsp1P58466 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.77□□□□□ -0.69
Ctdsp1P58466 AC153794.1-201ENSMUST00000169148 126 ntBASIC10.77□□□□□ -0.69
Ctdsp1P58466 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Ctdsp1P58466 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ctdsp1P58466 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC10.77□□□□□ -0.69
Ctdsp1P58466 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC10.77□□□□□ -0.69
Ctdsp1P58466 Gm30025-201ENSMUST00000218555 728 ntBASIC10.77□□□□□ -0.69
Ctdsp1P58466 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ctdsp1P58466 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ctdsp1P58466 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ctdsp1P58466 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ctdsp1P58466 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.77□□□□□ -0.69
Ctdsp1P58466 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ctdsp1P58466 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ctdsp1P58466 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms