Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CckbrP56481 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.87□□□□□ -0.35
CckbrP56481 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CckbrP56481 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CckbrP56481 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CckbrP56481 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CckbrP56481 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CckbrP56481 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CckbrP56481 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CckbrP56481 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.86□□□□□ -0.35
CckbrP56481 Gm27838-201ENSMUST00000184829 128 ntBASIC12.86□□□□□ -0.35
CckbrP56481 Gm10766-202ENSMUST00000194123 606 ntBASIC12.86□□□□□ -0.35
CckbrP56481 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.86□□□□□ -0.35
CckbrP56481 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.86□□□□□ -0.35
CckbrP56481 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.86□□□□□ -0.35
CckbrP56481 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.86□□□□□ -0.35
CckbrP56481 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CckbrP56481 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CckbrP56481 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CckbrP56481 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.85□□□□□ -0.35
CckbrP56481 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.85□□□□□ -0.35
CckbrP56481 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Gm14057-201ENSMUST00000120631 482 ntBASIC12.85□□□□□ -0.35
CckbrP56481 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.85□□□□□ -0.35
CckbrP56481 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.85□□□□□ -0.35
CckbrP56481 Gm10576-201ENSMUST00000191927 825 ntBASIC12.85□□□□□ -0.35
CckbrP56481 Gm29741-201ENSMUST00000192667 421 ntBASIC12.85□□□□□ -0.35
CckbrP56481 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.85□□□□□ -0.35
CckbrP56481 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CckbrP56481 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CckbrP56481 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CckbrP56481 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CckbrP56481 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CckbrP56481 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CckbrP56481 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
CckbrP56481 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CckbrP56481 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
CckbrP56481 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CckbrP56481 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CckbrP56481 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CckbrP56481 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CckbrP56481 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CckbrP56481 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
CckbrP56481 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
CckbrP56481 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.84□□□□□ -0.35
CckbrP56481 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CckbrP56481 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CckbrP56481 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
CckbrP56481 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CckbrP56481 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CckbrP56481 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.84□□□□□ -0.35
CckbrP56481 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CckbrP56481 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.84□□□□□ -0.35
CckbrP56481 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CckbrP56481 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CckbrP56481 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CckbrP56481 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CckbrP56481 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CckbrP56481 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CckbrP56481 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms