Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Mir6392-201ENSMUST00000184924 108 ntBASIC13.64□□□□□ -0.23
CtskP55097 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.64□□□□□ -0.23
CtskP55097 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.64□□□□□ -0.23
CtskP55097 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.64□□□□□ -0.23
CtskP55097 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CtskP55097 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CtskP55097 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.64□□□□□ -0.23
CtskP55097 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CtskP55097 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
CtskP55097 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.63□□□□□ -0.23
CtskP55097 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CtskP55097 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CtskP55097 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.63□□□□□ -0.23
CtskP55097 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CtskP55097 Gm28196-201ENSMUST00000187719 640 ntBASIC13.63□□□□□ -0.23
CtskP55097 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.63□□□□□ -0.23
CtskP55097 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.63□□□□□ -0.23
CtskP55097 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.63□□□□□ -0.23
CtskP55097 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.63□□□□□ -0.23
CtskP55097 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.63□□□□□ -0.23
CtskP55097 Gm25857-201ENSMUST00000082788 129 ntBASIC13.63□□□□□ -0.23
CtskP55097 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.63□□□□□ -0.23
CtskP55097 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CtskP55097 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CtskP55097 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.63□□□□□ -0.23
CtskP55097 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.62□□□□□ -0.23
CtskP55097 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.62□□□□□ -0.23
CtskP55097 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.62□□□□□ -0.23
CtskP55097 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Gm11918-201ENSMUST00000121660 179 ntBASIC13.62□□□□□ -0.23
CtskP55097 Gm12882-201ENSMUST00000121696 517 ntBASIC13.62□□□□□ -0.23
CtskP55097 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CtskP55097 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.62□□□□□ -0.23
CtskP55097 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CtskP55097 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CtskP55097 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.62□□□□□ -0.23
CtskP55097 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CtskP55097 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.61□□□□□ -0.23
CtskP55097 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CtskP55097 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CtskP55097 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CtskP55097 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms