Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Sox1P53783 Gm7809-201ENSMUST00000153199 742 ntBASIC14.09□□□□□ -0.15
Sox1P53783 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox1P53783 Gm37922-201ENSMUST00000195596 455 ntBASIC14.09□□□□□ -0.15
Sox1P53783 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Gm5051-201ENSMUST00000204085 485 ntBASIC14.09□□□□□ -0.15
Sox1P53783 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox1P53783 Morn2-202ENSMUST00000227729 656 ntBASIC14.09□□□□□ -0.15
Sox1P53783 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.09□□□□□ -0.15
Sox1P53783 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Sox1P53783 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox1P53783 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sox1P53783 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox1P53783 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.08□□□□□ -0.15
Sox1P53783 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox1P53783 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Sox1P53783 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Sox1P53783 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Sox1P53783 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.08□□□□□ -0.16
Sox1P53783 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.08□□□□□ -0.16
Sox1P53783 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Sox1P53783 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.08□□□□□ -0.16
Sox1P53783 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.08□□□□□ -0.16
Sox1P53783 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
Sox1P53783 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Sox1P53783 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Sox1P53783 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox1P53783 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Sox1P53783 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox1P53783 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.07□□□□□ -0.16
Sox1P53783 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sox1P53783 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Gm11222-201ENSMUST00000119005 738 ntBASIC14.07□□□□□ -0.16
Sox1P53783 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sox1P53783 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sox1P53783 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.07□□□□□ -0.16
Sox1P53783 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox1P53783 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.07□□□□□ -0.16
Sox1P53783 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.07□□□□□ -0.16
Sox1P53783 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox1P53783 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox1P53783 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms