Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnfP51944 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.19□□□□□ -0.3
CcnfP51944 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.19□□□□□ -0.3
CcnfP51944 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CcnfP51944 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CcnfP51944 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CcnfP51944 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.19□□□□□ -0.3
CcnfP51944 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnfP51944 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnfP51944 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnfP51944 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CcnfP51944 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.19□□□□□ -0.3
CcnfP51944 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcnfP51944 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.19□□□□□ -0.3
CcnfP51944 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.18□□□□□ -0.3
CcnfP51944 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.18□□□□□ -0.3
CcnfP51944 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.18□□□□□ -0.3
CcnfP51944 Gm11543-201ENSMUST00000120758 370 ntBASIC13.18□□□□□ -0.3
CcnfP51944 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CcnfP51944 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Mir5131-201ENSMUST00000175426 93 ntBASIC13.18□□□□□ -0.3
CcnfP51944 Mir8098-201ENSMUST00000184011 137 ntBASIC13.18□□□□□ -0.3
CcnfP51944 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.18□□□□□ -0.3
CcnfP51944 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CcnfP51944 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CcnfP51944 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.18□□□□□ -0.3
CcnfP51944 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.18□□□□□ -0.3
CcnfP51944 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CcnfP51944 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.18□□□□□ -0.3
CcnfP51944 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CcnfP51944 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnfP51944 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnfP51944 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CcnfP51944 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.17□□□□□ -0.3
CcnfP51944 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CcnfP51944 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CcnfP51944 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnfP51944 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnfP51944 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnfP51944 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.17□□□□□ -0.3
CcnfP51944 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnfP51944 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnfP51944 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.17□□□□□ -0.3
CcnfP51944 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CcnfP51944 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.17□□□□□ -0.3
CcnfP51944 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.17□□□□□ -0.3
CcnfP51944 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.17□□□□□ -0.3
CcnfP51944 AA619741-201ENSMUST00000195095 646 ntBASIC13.17□□□□□ -0.3
CcnfP51944 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnfP51944 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.17□□□□□ -0.3
CcnfP51944 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CcnfP51944 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
CcnfP51944 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.17□□□□□ -0.3
CcnfP51944 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.17□□□□□ -0.3
CcnfP51944 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnfP51944 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CcnfP51944 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnfP51944 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnfP51944 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CcnfP51944 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnfP51944 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnfP51944 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CcnfP51944 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.16□□□□□ -0.3
CcnfP51944 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnfP51944 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnfP51944 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CcnfP51944 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CcnfP51944 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CcnfP51944 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnfP51944 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnfP51944 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
CcnfP51944 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnfP51944 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.16□□□□□ -0.3
CcnfP51944 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnfP51944 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnfP51944 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
CcnfP51944 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnfP51944 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnfP51944 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.16□□□□□ -0.3
CcnfP51944 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.16□□□□□ -0.3
CcnfP51944 Gm9103-201ENSMUST00000119371 405 ntBASIC13.16□□□□□ -0.3
CcnfP51944 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.16□□□□□ -0.3
CcnfP51944 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms