Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Lhx3P50481 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lhx3P50481 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lhx3P50481 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Lhx3P50481 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.01□□□□□ -0.17
Lhx3P50481 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Lhx3P50481 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.01□□□□□ -0.17
Lhx3P50481 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Lhx3P50481 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Lhx3P50481 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lhx3P50481 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.01□□□□□ -0.17
Lhx3P50481 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.01□□□□□ -0.17
Lhx3P50481 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lhx3P50481 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.01□□□□□ -0.17
Lhx3P50481 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.01□□□□□ -0.17
Lhx3P50481 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.01□□□□□ -0.17
Lhx3P50481 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.01□□□□□ -0.17
Lhx3P50481 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Lhx3P50481 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.01□□□□□ -0.17
Lhx3P50481 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Lhx3P50481 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Lhx3P50481 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx3P50481 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Gm20632-201ENSMUST00000176760 2427 ntBASIC14□□□□□ -0.17
Lhx3P50481 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Lhx3P50481 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Gm15678-201ENSMUST00000117573 960 ntBASIC14□□□□□ -0.17
Lhx3P50481 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14□□□□□ -0.17
Lhx3P50481 Gm12091-201ENSMUST00000146791 830 ntBASIC14□□□□□ -0.17
Lhx3P50481 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Gm8515-201ENSMUST00000194852 576 ntBASIC14□□□□□ -0.17
Lhx3P50481 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Lhx3P50481 Arhgef33-209ENSMUST00000225223 714 ntBASIC14□□□□□ -0.17
Lhx3P50481 AC192088.1-201ENSMUST00000227561 301 ntBASIC14□□□□□ -0.17
Lhx3P50481 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14□□□□□ -0.17
Lhx3P50481 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14□□□□□ -0.17
Lhx3P50481 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14□□□□□ -0.17
Lhx3P50481 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx3P50481 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.99□□□□□ -0.17
Lhx3P50481 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Lhx3P50481 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Lhx3P50481 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.99□□□□□ -0.17
Lhx3P50481 Gm15770-201ENSMUST00000117498 584 ntBASIC13.99□□□□□ -0.17
Lhx3P50481 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.99□□□□□ -0.17
Lhx3P50481 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Gm6745-201ENSMUST00000199216 526 ntBASIC13.99□□□□□ -0.17
Lhx3P50481 Gm18307-201ENSMUST00000206864 949 ntBASIC13.99□□□□□ -0.17
Lhx3P50481 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.99□□□□□ -0.17
Lhx3P50481 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms