Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.49□□□□□ -0.57
Nkx2-1P50220 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.49□□□□□ -0.57
Nkx2-1P50220 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.49□□□□□ -0.57
Nkx2-1P50220 Gm10154-201ENSMUST00000084445 354 ntBASIC11.49□□□□□ -0.57
Nkx2-1P50220 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nkx2-1P50220 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Gm27628-201ENSMUST00000184911 107 ntBASIC11.48□□□□□ -0.57
Nkx2-1P50220 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx2-1P50220 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-1P50220 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Gm5479-201ENSMUST00000160578 435 ntBASIC11.47□□□□□ -0.57
Nkx2-1P50220 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.47□□□□□ -0.57
Nkx2-1P50220 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms