Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
GdnfP48540 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.16□□□□□ -0.46
GdnfP48540 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.16□□□□□ -0.46
GdnfP48540 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
GdnfP48540 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
GdnfP48540 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.16□□□□□ -0.46
GdnfP48540 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
GdnfP48540 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.16□□□□□ -0.46
GdnfP48540 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.16□□□□□ -0.46
GdnfP48540 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.16□□□□□ -0.46
GdnfP48540 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
GdnfP48540 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
GdnfP48540 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.16□□□□□ -0.46
GdnfP48540 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GdnfP48540 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
GdnfP48540 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
GdnfP48540 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
GdnfP48540 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.15□□□□□ -0.46
GdnfP48540 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
GdnfP48540 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Gm6973-201ENSMUST00000117080 721 ntBASIC12.15□□□□□ -0.46
GdnfP48540 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.15□□□□□ -0.46
GdnfP48540 Gm11745-201ENSMUST00000121669 448 ntBASIC12.15□□□□□ -0.46
GdnfP48540 Gm14822-201ENSMUST00000122247 291 ntBASIC12.15□□□□□ -0.46
GdnfP48540 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Gm25925-201ENSMUST00000158314 306 ntBASIC12.15□□□□□ -0.46
GdnfP48540 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.15□□□□□ -0.46
GdnfP48540 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.15□□□□□ -0.46
GdnfP48540 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Gm45612-201ENSMUST00000211320 160 ntBASIC12.15□□□□□ -0.46
GdnfP48540 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
GdnfP48540 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
GdnfP48540 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.15□□□□□ -0.46
GdnfP48540 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
GdnfP48540 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
GdnfP48540 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
GdnfP48540 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GdnfP48540 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
GdnfP48540 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
GdnfP48540 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
GdnfP48540 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.47
GdnfP48540 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
GdnfP48540 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
GdnfP48540 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
GdnfP48540 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms