Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Gm26083-201ENSMUST00000157904 193 ntBASIC13.31□□□□□ -0.28
Sox18P43680 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.31□□□□□ -0.28
Sox18P43680 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.31□□□□□ -0.28
Sox18P43680 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.31□□□□□ -0.28
Sox18P43680 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sox18P43680 Gm45657-201ENSMUST00000211318 1349 ntBASIC13.31□□□□□ -0.28
Sox18P43680 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sox18P43680 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox18P43680 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox18P43680 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox18P43680 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Gm25509-201ENSMUST00000116985 106 ntBASIC13.3□□□□□ -0.28
Sox18P43680 Gm13342-201ENSMUST00000121055 207 ntBASIC13.3□□□□□ -0.28
Sox18P43680 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.3□□□□□ -0.28
Sox18P43680 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.3□□□□□ -0.28
Sox18P43680 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.3□□□□□ -0.28
Sox18P43680 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.3□□□□□ -0.28
Sox18P43680 Gm45359-201ENSMUST00000210635 427 ntBASIC13.3□□□□□ -0.28
Sox18P43680 Gm6983-201ENSMUST00000214912 628 ntBASIC13.3□□□□□ -0.28
Sox18P43680 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox18P43680 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.3□□□□□ -0.28
Sox18P43680 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox18P43680 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox18P43680 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Sox18P43680 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox18P43680 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Sox18P43680 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sox18P43680 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Sox18P43680 Mir877-201ENSMUST00000104738 85 ntBASIC13.29□□□□□ -0.28
Sox18P43680 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.29□□□□□ -0.28
Sox18P43680 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sox18P43680 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox18P43680 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.29□□□□□ -0.28
Sox18P43680 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sox18P43680 Gm22331-201ENSMUST00000158066 136 ntBASIC13.29□□□□□ -0.28
Sox18P43680 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Gm43758-201ENSMUST00000199500 367 ntBASIC13.29□□□□□ -0.28
Sox18P43680 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.29□□□□□ -0.28
Sox18P43680 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.29□□□□□ -0.28
Sox18P43680 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Carlr-201ENSMUST00000181515 2574 ntBASIC13.29□□□□□ -0.28
Sox18P43680 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sox18P43680 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Sox18P43680 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.29□□□□□ -0.28
Sox18P43680 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms