Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.11□□□□□ -0.31
Cdx2P43241 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdx2P43241 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdx2P43241 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdx2P43241 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdx2P43241 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdx2P43241 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdx2P43241 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdx2P43241 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdx2P43241 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdx2P43241 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdx2P43241 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdx2P43241 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdx2P43241 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cdx2P43241 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cdx2P43241 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Gm4271-201ENSMUST00000174444 973 ntBASIC13.1□□□□□ -0.31
Cdx2P43241 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdx2P43241 Mir8109-201ENSMUST00000184375 117 ntBASIC13.1□□□□□ -0.31
Cdx2P43241 Gm37008-201ENSMUST00000195712 319 ntBASIC13.1□□□□□ -0.31
Cdx2P43241 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.1□□□□□ -0.31
Cdx2P43241 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.1□□□□□ -0.31
Cdx2P43241 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cdx2P43241 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cdx2P43241 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.1□□□□□ -0.31
Cdx2P43241 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cdx2P43241 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdx2P43241 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdx2P43241 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.09□□□□□ -0.31
Cdx2P43241 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Cdx2P43241 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cdx2P43241 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cdx2P43241 Gm22018-201ENSMUST00000104357 131 ntBASIC13.09□□□□□ -0.31
Cdx2P43241 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cdx2P43241 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.09□□□□□ -0.31
Cdx2P43241 Gm27516-201ENSMUST00000184237 98 ntBASIC13.09□□□□□ -0.31
Cdx2P43241 Gm29608-201ENSMUST00000190444 463 ntBASIC13.09□□□□□ -0.31
Cdx2P43241 Gm43822-201ENSMUST00000200285 476 ntBASIC13.09□□□□□ -0.31
Cdx2P43241 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.09□□□□□ -0.31
Cdx2P43241 Gm45930-201ENSMUST00000221330 292 ntBASIC13.09□□□□□ -0.31
Cdx2P43241 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cdx2P43241 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdx2P43241 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.09□□□□□ -0.31
Cdx2P43241 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Cdx2P43241 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
Cdx2P43241 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdx2P43241 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdx2P43241 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cdx2P43241 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdx2P43241 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdx2P43241 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdx2P43241 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cdx2P43241 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdx2P43241 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdx2P43241 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdx2P43241 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms