Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HttP42859 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HttP42859 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HttP42859 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HttP42859 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HttP42859 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.4□□□□□ -0.1
HttP42859 Gm26956-201ENSMUST00000182176 986 ntBASIC14.4□□□□□ -0.1
HttP42859 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HttP42859 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HttP42859 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.4□□□□□ -0.1
HttP42859 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HttP42859 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HttP42859 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HttP42859 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HttP42859 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HttP42859 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
HttP42859 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Gm13996-201ENSMUST00000118456 430 ntBASIC14.39□□□□□ -0.11
HttP42859 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Gm26361-201ENSMUST00000158868 186 ntBASIC14.39□□□□□ -0.11
HttP42859 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HttP42859 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.39□□□□□ -0.11
HttP42859 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.39□□□□□ -0.11
HttP42859 Gm20392-201ENSMUST00000173047 701 ntBASIC14.39□□□□□ -0.11
HttP42859 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HttP42859 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HttP42859 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.39□□□□□ -0.11
HttP42859 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HttP42859 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
HttP42859 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HttP42859 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HttP42859 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HttP42859 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HttP42859 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.38□□□□□ -0.11
HttP42859 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.38□□□□□ -0.11
HttP42859 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.38□□□□□ -0.11
HttP42859 AC174797.2-202ENSMUST00000225729 568 ntBASIC14.38□□□□□ -0.11
HttP42859 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.38□□□□□ -0.11
HttP42859 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.38□□□□□ -0.11
HttP42859 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HttP42859 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.38□□□□□ -0.11
HttP42859 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HttP42859 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.38□□□□□ -0.11
HttP42859 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
HttP42859 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HttP42859 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.38□□□□□ -0.11
HttP42859 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.38□□□□□ -0.11
HttP42859 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC14.38□□□□□ -0.11
HttP42859 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.38□□□□□ -0.11
HttP42859 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
HttP42859 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HttP42859 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HttP42859 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HttP42859 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HttP42859 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HttP42859 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HttP42859 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HttP42859 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HttP42859 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.37□□□□□ -0.11
HttP42859 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HttP42859 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.37□□□□□ -0.11
HttP42859 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.37□□□□□ -0.11
HttP42859 Gm8913-201ENSMUST00000209491 641 ntBASIC14.37□□□□□ -0.11
HttP42859 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.37□□□□□ -0.11
HttP42859 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HttP42859 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.37□□□□□ -0.11
HttP42859 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HttP42859 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.37□□□□□ -0.11
HttP42859 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 Mir698-201ENSMUST00000102164 109 ntBASIC14.37□□□□□ -0.11
HttP42859 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.37□□□□□ -0.11
HttP42859 Gm38210-201ENSMUST00000191944 809 ntBASIC14.37□□□□□ -0.11
HttP42859 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms