Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-2P42586 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.7□□□□□ -0.38
Nkx2-2P42586 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.7□□□□□ -0.38
Nkx2-2P42586 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.7□□□□□ -0.38
Nkx2-2P42586 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx2-2P42586 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.7□□□□□ -0.38
Nkx2-2P42586 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx2-2P42586 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.69□□□□□ -0.38
Nkx2-2P42586 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Gm9522-201ENSMUST00000182394 926 ntBASIC12.69□□□□□ -0.38
Nkx2-2P42586 Gm18905-201ENSMUST00000205454 928 ntBASIC12.69□□□□□ -0.38
Nkx2-2P42586 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Nkx2-2P42586 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.69□□□□□ -0.38
Nkx2-2P42586 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-2P42586 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.68□□□□□ -0.38
Nkx2-2P42586 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.68□□□□□ -0.38
Nkx2-2P42586 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Gm14719-201ENSMUST00000121891 340 ntBASIC12.68□□□□□ -0.38
Nkx2-2P42586 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Gm29667-201ENSMUST00000190817 490 ntBASIC12.68□□□□□ -0.38
Nkx2-2P42586 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.68□□□□□ -0.38
Nkx2-2P42586 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms