Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.03□□□□□ -0.32
Sox6P40645 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.03□□□□□ -0.32
Sox6P40645 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 Gm23935-201ENSMUST00000102303 57 ntBASIC13.03□□□□□ -0.32
Sox6P40645 Gm24270-201ENSMUST00000102326 57 ntBASIC13.03□□□□□ -0.32
Sox6P40645 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 Gm24245-201ENSMUST00000157318 57 ntBASIC13.03□□□□□ -0.32
Sox6P40645 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox6P40645 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox6P40645 Mir6990-201ENSMUST00000183724 91 ntBASIC13.03□□□□□ -0.32
Sox6P40645 Gm44335-201ENSMUST00000196879 141 ntBASIC13.03□□□□□ -0.32
Sox6P40645 Gm44297-201ENSMUST00000198304 141 ntBASIC13.03□□□□□ -0.32
Sox6P40645 Gm44346-201ENSMUST00000198851 141 ntBASIC13.03□□□□□ -0.32
Sox6P40645 Gm43125-201ENSMUST00000201724 730 ntBASIC13.03□□□□□ -0.32
Sox6P40645 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox6P40645 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sox6P40645 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.03□□□□□ -0.32
Sox6P40645 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sox6P40645 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.03□□□□□ -0.32
Sox6P40645 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.03□□□□□ -0.32
Sox6P40645 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Sox6P40645 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sox6P40645 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox6P40645 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox6P40645 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox6P40645 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Sox6P40645 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox6P40645 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox6P40645 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox6P40645 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox6P40645 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.02□□□□□ -0.32
Sox6P40645 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox6P40645 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sox6P40645 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox6P40645 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox6P40645 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.02□□□□□ -0.32
Sox6P40645 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.02□□□□□ -0.32
Sox6P40645 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.02□□□□□ -0.33
Sox6P40645 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Sox6P40645 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.02□□□□□ -0.33
Sox6P40645 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.02□□□□□ -0.33
Sox6P40645 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.02□□□□□ -0.33
Sox6P40645 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.02□□□□□ -0.33
Sox6P40645 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.02□□□□□ -0.33
Sox6P40645 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.02□□□□□ -0.33
Sox6P40645 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sox6P40645 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sox6P40645 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Sox6P40645 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sox6P40645 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sox6P40645 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox6P40645 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox6P40645 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox6P40645 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.01□□□□□ -0.33
Sox6P40645 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms