Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.82□□□□□ -0.2
LdlrP35951 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LdlrP35951 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LdlrP35951 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LdlrP35951 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
LdlrP35951 Gm15693-201ENSMUST00000120470 637 ntBASIC13.81□□□□□ -0.2
LdlrP35951 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.81□□□□□ -0.2
LdlrP35951 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.81□□□□□ -0.2
LdlrP35951 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.81□□□□□ -0.2
LdlrP35951 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.81□□□□□ -0.2
LdlrP35951 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.81□□□□□ -0.2
LdlrP35951 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.81□□□□□ -0.2
LdlrP35951 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LdlrP35951 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LdlrP35951 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LdlrP35951 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
LdlrP35951 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.8□□□□□ -0.2
LdlrP35951 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.8□□□□□ -0.2
LdlrP35951 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.8□□□□□ -0.2
LdlrP35951 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.8□□□□□ -0.2
LdlrP35951 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.8□□□□□ -0.2
LdlrP35951 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.8□□□□□ -0.2
LdlrP35951 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Gm5866-201ENSMUST00000177881 973 ntBASIC13.8□□□□□ -0.2
LdlrP35951 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LdlrP35951 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LdlrP35951 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LdlrP35951 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.79□□□□□ -0.2
LdlrP35951 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
LdlrP35951 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LdlrP35951 Gm27306-201ENSMUST00000183970 107 ntBASIC13.79□□□□□ -0.2
LdlrP35951 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.79□□□□□ -0.2
LdlrP35951 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.79□□□□□ -0.2
LdlrP35951 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.79□□□□□ -0.2
LdlrP35951 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
LdlrP35951 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms