Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 BC001981-202ENSMUST00000191393 1545 ntBASIC12.88□□□□□ -0.35
Hoxc5P32043 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc5P32043 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Hoxc5P32043 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Hoxc5P32043 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.87□□□□□ -0.35
Hoxc5P32043 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.87□□□□□ -0.35
Hoxc5P32043 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Hoxc5P32043 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.87□□□□□ -0.35
Hoxc5P32043 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hoxc5P32043 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.87□□□□□ -0.35
Hoxc5P32043 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.87□□□□□ -0.35
Hoxc5P32043 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hoxc5P32043 Gm9824-201ENSMUST00000178707 561 ntBASIC12.87□□□□□ -0.35
Hoxc5P32043 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Hoxc5P32043 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Hoxc5P32043 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Hoxc5P32043 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.87□□□□□ -0.35
Hoxc5P32043 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hoxc5P32043 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxc5P32043 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Hoxc5P32043 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Hoxc5P32043 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Hoxc5P32043 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.86□□□□□ -0.35
Hoxc5P32043 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.86□□□□□ -0.35
Hoxc5P32043 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.86□□□□□ -0.35
Hoxc5P32043 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.86□□□□□ -0.35
Hoxc5P32043 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.86□□□□□ -0.35
Hoxc5P32043 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Mir125a-201ENSMUST00000083545 68 ntBASIC12.86□□□□□ -0.35
Hoxc5P32043 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Hoxc5P32043 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxc5P32043 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc5P32043 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.85□□□□□ -0.35
Hoxc5P32043 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc5P32043 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc5P32043 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc5P32043 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc5P32043 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.85□□□□□ -0.35
Hoxc5P32043 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc5P32043 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Hoxc5P32043 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc5P32043 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc5P32043 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.85□□□□□ -0.35
Hoxc5P32043 Gm25287-201ENSMUST00000103846 110 ntBASIC12.85□□□□□ -0.35
Hoxc5P32043 Gm22918-201ENSMUST00000103855 110 ntBASIC12.85□□□□□ -0.35
Hoxc5P32043 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc5P32043 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc5P32043 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc5P32043 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc5P32043 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc5P32043 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Hoxc5P32043 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.85□□□□□ -0.35
Hoxc5P32043 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc5P32043 Gm45453-201ENSMUST00000211758 853 ntBASIC12.85□□□□□ -0.35
Hoxc5P32043 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc5P32043 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms