Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Col8a2P25318 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a2P25318 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Col8a2P25318 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col8a2P25318 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col8a2P25318 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Col8a2P25318 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Col8a2P25318 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.56□□□□□ -0.56
Col8a2P25318 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Col8a2P25318 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.56□□□□□ -0.56
Col8a2P25318 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Col8a2P25318 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Col8a2P25318 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.56□□□□□ -0.56
Col8a2P25318 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Col8a2P25318 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Col8a2P25318 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.56□□□□□ -0.56
Col8a2P25318 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col8a2P25318 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Col8a2P25318 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.55□□□□□ -0.56
Col8a2P25318 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Col8a2P25318 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Col8a2P25318 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col8a2P25318 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.55□□□□□ -0.56
Col8a2P25318 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.55□□□□□ -0.56
Col8a2P25318 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.55□□□□□ -0.56
Col8a2P25318 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.55□□□□□ -0.56
Col8a2P25318 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Col8a2P25318 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Col8a2P25318 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.55□□□□□ -0.56
Col8a2P25318 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.55□□□□□ -0.56
Col8a2P25318 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Col8a2P25318 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.55□□□□□ -0.56
Col8a2P25318 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.55□□□□□ -0.56
Col8a2P25318 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Col8a2P25318 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col8a2P25318 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col8a2P25318 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.54□□□□□ -0.56
Col8a2P25318 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.54□□□□□ -0.56
Col8a2P25318 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Col8a2P25318 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.54□□□□□ -0.56
Col8a2P25318 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Matn2-206ENSMUST00000228570 2798 ntBASIC11.54□□□□□ -0.56
Col8a2P25318 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms