Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Clk1P22518 Gm13015-201ENSMUST00000118674 204 ntBASIC12.97□□□□□ -0.33
Clk1P22518 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.97□□□□□ -0.33
Clk1P22518 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.97□□□□□ -0.33
Clk1P22518 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Clk1P22518 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Clk1P22518 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clk1P22518 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Clk1P22518 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Clk1P22518 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.96□□□□□ -0.33
Clk1P22518 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.96□□□□□ -0.33
Clk1P22518 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Mir449b-201ENSMUST00000104833 80 ntBASIC12.96□□□□□ -0.33
Clk1P22518 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.96□□□□□ -0.33
Clk1P22518 Gm15957-201ENSMUST00000118893 974 ntBASIC12.96□□□□□ -0.33
Clk1P22518 Gm6222-201ENSMUST00000120787 396 ntBASIC12.96□□□□□ -0.33
Clk1P22518 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Clk1P22518 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.96□□□□□ -0.33
Clk1P22518 Gm27430-201ENSMUST00000184585 107 ntBASIC12.96□□□□□ -0.33
Clk1P22518 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.96□□□□□ -0.33
Clk1P22518 Gm44333-201ENSMUST00000197168 107 ntBASIC12.96□□□□□ -0.33
Clk1P22518 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Clk1P22518 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Clk1P22518 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clk1P22518 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clk1P22518 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clk1P22518 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Clk1P22518 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.96□□□□□ -0.34
Clk1P22518 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Clk1P22518 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clk1P22518 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Clk1P22518 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clk1P22518 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clk1P22518 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Clk1P22518 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Clk1P22518 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.95□□□□□ -0.34
Clk1P22518 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.95□□□□□ -0.34
Clk1P22518 Gm13823-201ENSMUST00000119930 345 ntBASIC12.95□□□□□ -0.34
Clk1P22518 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Gm7774-201ENSMUST00000200064 533 ntBASIC12.95□□□□□ -0.34
Clk1P22518 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Clk1P22518 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Clk1P22518 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms